Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 AC100803.2-201ENST00000562459 1963 ntBASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 MINOS1P3-201ENST00000457048 203 ntBASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 AL138831.2-201ENST00000606564 490 ntBASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAM1L1Q8N609 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 AC097374.2-201ENST00000618617 1306 ntBASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 NUS1P1-201ENST00000446295 882 ntBASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAM1L1Q8N609 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms