Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 LINC02084-201ENST00000606069 1096 ntBASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 C20orf181-201ENST00000623918 480 ntBASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL27A1Q8IZC6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 AP000344.2-201ENST00000512987 629 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 MIR4469-201ENST00000583919 79 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 MRPL20P1-201ENST00000400819 433 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 AC109462.3-201ENST00000573934 613 ntBASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.78■□□□□ 0.28
COL27A1Q8IZC6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL27A1Q8IZC6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 CNN2P11-201ENST00000429351 262 ntBASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 RHOQP3-201ENST00000437982 621 ntBASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 DUTP2-201ENST00000519164 463 ntBASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
COL27A1Q8IZC6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms