Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 LINC01311-201ENST00000565162 1445 ntBASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 AC022616.7-201ENST00000525383 220 ntBASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC116Q8IYX3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC116Q8IYX3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
CCDC116Q8IYX3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
CCDC116Q8IYX3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 AC012317.2-201ENST00000623305 2251 ntBASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 KRT18P55-202ENST00000578578 1546 ntBASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC116Q8IYX3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 MIR662-201ENST00000384847 95 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AP003733.1-201ENST00000491725 852 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 VENTXP5-201ENST00000523979 775 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 LINC01238-205ENST00000567549 1107 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AC004263.2-201ENST00000617183 678 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms