Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 AL355385.1-201ENST00000606123 409 ntBASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 AP000867.4-201ENST00000641616 219 ntBASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 AC079781.4-201ENST00000641908 219 ntBASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEFF1Q8IYR6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 AC004967.1-201ENST00000453589 447 ntBASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 AC027796.2-201ENST00000575326 344 ntBASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 AC134684.3-201ENST00000641758 218 ntBASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEFF1Q8IYR6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 LAGE3P1-201ENST00000425356 484 ntBASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 AC007967.3-201ENST00000434308 558 ntBASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 AC009947.1-201ENST00000444350 727 ntBASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEFF1Q8IYR6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 AC002347.1-201ENST00000569543 541 ntBASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms