Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 SPDYE13P-201ENST00000445314 798 ntBASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 AL049597.2-201ENST00000565575 961 ntBASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 GNAS-203ENST00000306120 1878 ntBASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 AC009154.2-201ENST00000621177 724 ntBASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 AC134043.2-201ENST00000624206 2238 ntBASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC65Q8IXS2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CCDC65Q8IXS2 AL353692.3-201ENST00000407031 1396 ntBASIC19.95■□□□□ 0.79
CCDC65Q8IXS2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 AC005332.3-201ENST00000589904 676 ntBASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC65Q8IXS2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AC067852.2-201ENST00000590513 2313 ntBASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AC100803.2-201ENST00000562459 1963 ntBASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 OR6D1P-202ENST00000641007 5290 ntBASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC65Q8IXS2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms