Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 MTCL1P1-201ENST00000446207 792 ntBASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 AC069148.1-201ENST00000608741 768 ntBASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SCUBE3Q8IX30 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SCUBE3Q8IX30 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCUBE3Q8IX30 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.89■□□□□ 0.62
SCUBE3Q8IX30 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCUBE3Q8IX30 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AP002383.4-201ENST00000442518 975 ntBASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AC112698.1-201ENST00000510299 916 ntBASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AL592071.1-201ENST00000611956 408 ntBASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AC093458.2-201ENST00000623150 629 ntBASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AC022898.2-201ENST00000616822 1312 ntBASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCUBE3Q8IX30 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 KRT18P1-202ENST00000452408 1331 ntBASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCUBE3Q8IX30 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms