Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 BX005266.1-201ENST00000473402 457 ntBASIC19.39■□□□□ 0.69
HERC6Q8IVU3 AC112698.1-201ENST00000510299 916 ntBASIC19.39■□□□□ 0.69
HERC6Q8IVU3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 MIR3197-201ENST00000582241 73 ntBASIC19.39■□□□□ 0.69
HERC6Q8IVU3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 AC005593.1-201ENST00000624894 515 ntBASIC19.39■□□□□ 0.69
HERC6Q8IVU3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 MCCD1P2-201ENST00000423228 335 ntBASIC19.38■□□□□ 0.69
HERC6Q8IVU3 KRT18P27-201ENST00000427733 1299 ntBASIC19.38■□□□□ 0.69
HERC6Q8IVU3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 AL022326.1-202ENST00000641533 845 ntBASIC19.38■□□□□ 0.69
HERC6Q8IVU3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC6Q8IVU3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 AC079776.2-201ENST00000641154 1609 ntBASIC19.37■□□□□ 0.69
HERC6Q8IVU3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 CYMP-203ENST00000474680 1263 ntBASIC19.37■□□□□ 0.69
HERC6Q8IVU3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 RFPL4AP1-201ENST00000530883 850 ntBASIC19.37■□□□□ 0.69
HERC6Q8IVU3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 AC005829.1-201ENST00000570002 483 ntBASIC19.37■□□□□ 0.69
HERC6Q8IVU3 PGM5P2-202ENST00000637225 1043 ntBASIC19.37■□□□□ 0.69
HERC6Q8IVU3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
HERC6Q8IVU3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 AC108751.1-201ENST00000490852 363 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 SNHG9-202ENST00000564014 471 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms