Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AP001160.2-201ENST00000596071 487 ntBASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AL589182.2-201ENST00000619332 1049 ntBASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AC079781.4-201ENST00000641908 219 ntBASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 PHGDH-209ENST00000641074 1780 ntBASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 AC004967.1-201ENST00000453589 447 ntBASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 AC064836.3-201ENST00000607928 673 ntBASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAS4Q8IUM7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NPAS4Q8IUM7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AC023274.1-201ENST00000418278 595 ntBASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AL020989.1-201ENST00000422979 469 ntBASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 MTDHP5-201ENST00000598980 586 ntBASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS4Q8IUM7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms