Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALYREFQ86V81 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALYREFQ86V81 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALYREFQ86V81 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.83■□□□□ 0.61
ALYREFQ86V81 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 IGHV3-47-201ENST00000425060 335 ntBASIC18.83■□□□□ 0.6
ALYREFQ86V81 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 KRT18P3-201ENST00000451602 1288 ntBASIC18.83■□□□□ 0.6
ALYREFQ86V81 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 AC145285.3-201ENST00000564603 959 ntBASIC18.83■□□□□ 0.6
ALYREFQ86V81 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 FAM215A-202ENST00000632077 792 ntBASIC18.83■□□□□ 0.6
ALYREFQ86V81 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALYREFQ86V81 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.83■□□□□ 0.6
ALYREFQ86V81 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC063926.2-201ENST00000623766 1308 ntBASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC067852.2-201ENST00000590513 2313 ntBASIC18.82■□□□□ 0.6
ALYREFQ86V81 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC018712.1-201ENST00000455767 687 ntBASIC18.82■□□□□ 0.6
ALYREFQ86V81 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALYREFQ86V81 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
ALYREFQ86V81 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 MIR662-201ENST00000384847 95 ntBASIC18.81■□□□□ 0.6
ALYREFQ86V81 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AP006288.1-201ENST00000446065 395 ntBASIC18.81■□□□□ 0.6
ALYREFQ86V81 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AC090616.6-201ENST00000582640 721 ntBASIC18.81■□□□□ 0.6
ALYREFQ86V81 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AC079602.3-201ENST00000623931 403 ntBASIC18.81■□□□□ 0.6
ALYREFQ86V81 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 AIRN-201ENST00000601203 4374 ntBASIC18.81■□□□□ 0.6
ALYREFQ86V81 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.81■□□□□ 0.6
ALYREFQ86V81 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALYREFQ86V81 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms