Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA1AQ71U36 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 AL023806.1-201ENST00000603994 1649 ntBASIC16.61■□□□□ 0.25
TUBA1AQ71U36 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 AC022211.2-201ENST00000585075 2527 ntBASIC16.61■□□□□ 0.25
TUBA1AQ71U36 LINC01568-207ENST00000641790 1380 ntBASIC16.61■□□□□ 0.25
TUBA1AQ71U36 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA1AQ71U36 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 AL596257.1-201ENST00000641463 2694 ntBASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBA1AQ71U36 REXO1L9P-201ENST00000604264 2108 ntBASIC16.6■□□□□ 0.25
TUBA1AQ71U36 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms