Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC079781.4-201ENST00000641908 219 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC132938.6-201ENST00000623828 1655 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 RPSAP43-201ENST00000402237 625 ntBASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AC007967.3-201ENST00000434308 558 ntBASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AC012640.2-201ENST00000561606 901 ntBASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AC040169.1-201ENST00000565382 521 ntBASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AL139424.1-201ENST00000607572 797 ntBASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC149Q6ZUS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 AP000867.4-201ENST00000641616 219 ntBASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 AL031598.1-201ENST00000561511 1773 ntBASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC149Q6ZUS6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AC022898.2-201ENST00000616822 1312 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 YBX2P1-201ENST00000394192 760 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AC096633.1-201ENST00000422446 749 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 PMS2P2-201ENST00000425039 1128 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 RNA5SP416-201ENST00000516838 111 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 NKAPP1-205ENST00000585790 367 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AP001160.2-201ENST00000596071 487 ntBASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms