Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 AC006011.2-201ENST00000621313 1158 ntBASIC18.17■□□□□ 0.5
PACS1Q6VY07 AC011558.1-201ENST00000623459 338 ntBASIC18.17■□□□□ 0.5
PACS1Q6VY07 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.17■□□□□ 0.5
PACS1Q6VY07 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS1Q6VY07 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 AL157888.1-201ENST00000631930 593 ntBASIC18.16■□□□□ 0.5
PACS1Q6VY07 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 AC139713.2-201ENST00000641328 2723 ntBASIC18.16■□□□□ 0.5
PACS1Q6VY07 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
PACS1Q6VY07 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PACS1Q6VY07 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 PP12613-201ENST00000424958 2230 ntBASIC18.15■□□□□ 0.5
PACS1Q6VY07 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PACS1Q6VY07 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.15■□□□□ 0.5
PACS1Q6VY07 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
PACS1Q6VY07 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PACS1Q6VY07 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PACS1Q6VY07 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PACS1Q6VY07 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PACS1Q6VY07 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PACS1Q6VY07 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.14■□□□□ 0.49
PACS1Q6VY07 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PACS1Q6VY07 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms