Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 AL353692.3-201ENST00000407031 1396 ntBASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 AC016734.2-201ENST00000624325 1377 ntBASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 AC020916.1-201ENST00000587762 1774 ntBASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TTC39BQ5VTQ0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 ESPNP-201ENST00000270691 2015 ntBASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 NPAP1P7-201ENST00000613027 823 ntBASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC39BQ5VTQ0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 GUSBP12-201ENST00000513727 720 ntBASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 AC093677.2-201ENST00000600169 1863 ntBASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 AC004263.2-201ENST00000617183 678 ntBASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TTC39BQ5VTQ0 LINC01126-201ENST00000623515 1646 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms