Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AC006116.8-202ENST00000587620 1550 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 REXO1L6P-201ENST00000603433 1515 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 NCF1C-201ENST00000438382 1427 ntBASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 MRPS18AP1-201ENST00000414458 589 ntBASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 AC022210.1-201ENST00000449856 793 ntBASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 IGHV3-72-202ENST00000621503 303 ntBASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF38BQ5VTL8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PRPF38BQ5VTL8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 AC112492.5-201ENST00000421897 457 ntBASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 FAM58DP-201ENST00000428076 619 ntBASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 GPS2P2-201ENST00000430745 888 ntBASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 KRT8P48-201ENST00000515599 1220 ntBASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 OR7E47P-204ENST00000575924 449 ntBASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF38BQ5VTL8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 AL355306.1-201ENST00000415580 579 ntBASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 SPDYE7P-202ENST00000420373 878 ntBASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 KRT17P8-201ENST00000540749 863 ntBASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
PRPF38BQ5VTL8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRPF38BQ5VTL8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms