Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 AL355312.1-201ENST00000407115 2176 ntBASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP13A4Q4VNC1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 AC139713.2-201ENST00000641328 2723 ntBASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 AC104076.2-201ENST00000448912 469 ntBASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP13A4Q4VNC1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 TSPY5P-201ENST00000426936 936 ntBASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 AC113404.2-201ENST00000507884 177 ntBASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
ATP13A4Q4VNC1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 AC004263.2-201ENST00000617183 678 ntBASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 HTR7P1-202ENST00000624664 4411 ntBASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP13A4Q4VNC1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP13A4Q4VNC1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms