Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC074386.1-202ENST00000463561 864 ntBASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AP005018.1-201ENST00000525475 301 ntBASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AC006504.4-201ENST00000592118 1568 ntBASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AC073592.4-201ENST00000623827 446 ntBASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 TEX21P-204ENST00000641479 1693 ntBASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO4Q2I0M5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 MIR661-201ENST00000384842 89 ntBASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 AL589182.2-201ENST00000619332 1049 ntBASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 AC004706.3-202ENST00000621574 984 ntBASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.33■□□□□ 0.36
RSPO4Q2I0M5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 AP002414.1-201ENST00000391405 1147 ntBASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 IGLL3P-201ENST00000412472 434 ntBASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 IGHV3-65-201ENST00000523210 341 ntBASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 AC010507.1-201ENST00000633895 436 ntBASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.32■□□□□ 0.36
RSPO4Q2I0M5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC055876.3-201ENST00000431496 288 ntBASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO4Q2I0M5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms