Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDR2Q01850 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDR2Q01850 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
CDR2Q01850 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.17■□□□□ 0.66
CDR2Q01850 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDR2Q01850 FAM8A6P-201ENST00000407496 1135 ntBASIC19.17■□□□□ 0.66
CDR2Q01850 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.17■□□□□ 0.66
CDR2Q01850 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.17■□□□□ 0.66
CDR2Q01850 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.17■□□□□ 0.66
CDR2Q01850 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.17■□□□□ 0.66
CDR2Q01850 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
CDR2Q01850 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDR2Q01850 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDR2Q01850 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
CDR2Q01850 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.16■□□□□ 0.66
CDR2Q01850 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 KRT18P48-201ENST00000434763 852 ntBASIC19.16■□□□□ 0.66
CDR2Q01850 KRT18P65-201ENST00000439811 1286 ntBASIC19.16■□□□□ 0.66
CDR2Q01850 KRT18P38-201ENST00000449496 1282 ntBASIC19.16■□□□□ 0.66
CDR2Q01850 HOMER2P1-201ENST00000455653 964 ntBASIC19.16■□□□□ 0.66
CDR2Q01850 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CDR2Q01850 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
CDR2Q01850 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.16■□□□□ 0.66
CDR2Q01850 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDR2Q01850 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.16■□□□□ 0.66
CDR2Q01850 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDR2Q01850 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.15■□□□□ 0.66
CDR2Q01850 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDR2Q01850 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.15■□□□□ 0.66
CDR2Q01850 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.15■□□□□ 0.66
CDR2Q01850 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.15■□□□□ 0.66
CDR2Q01850 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.15■□□□□ 0.66
CDR2Q01850 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDR2Q01850 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDR2Q01850 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDR2Q01850 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms