Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST1H3AP68431 IGHGP-201ENST00000390555 1178 ntBASIC15.72■□□□□ 0.11
HIST1H3AP68431 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST1H3AP68431 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST1H3AP68431 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 AC063952.2-201ENST00000498792 1227 ntBASIC15.72■□□□□ 0.11
HIST1H3AP68431 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIST1H3AP68431 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 LINC00896-202ENST00000609602 2128 ntBASIC15.72■□□□□ 0.11
HIST1H3AP68431 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 AC009154.2-201ENST00000621177 724 ntBASIC15.72■□□□□ 0.11
HIST1H3AP68431 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIST1H3AP68431 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIST1H3AP68431 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 RCN1P1-201ENST00000400413 996 ntBASIC15.71■□□□□ 0.11
HIST1H3AP68431 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 AC112907.2-201ENST00000448639 330 ntBASIC15.71■□□□□ 0.11
HIST1H3AP68431 AL359075.1-203ENST00000462729 1002 ntBASIC15.71■□□□□ 0.11
HIST1H3AP68431 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HIST1H3AP68431 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H3AP68431 AC005332.8-201ENST00000622750 2735 ntBASIC15.71■□□□□ 0.11
HIST1H3AP68431 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H3AP68431 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.71■□□□□ 0.1
HIST1H3AP68431 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 AP003733.1-201ENST00000491725 852 ntBASIC15.7■□□□□ 0.1
HIST1H3AP68431 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ZNF444P1-201ENST00000559497 298 ntBASIC15.7■□□□□ 0.1
HIST1H3AP68431 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H3AP68431 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H3AP68431 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H3AP68431 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 LTB4R2-202ENST00000528054 3092 ntBASIC15.69■□□□□ 0.1
HIST1H3AP68431 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H3AP68431 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H3AP68431 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H3AP68431 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms