Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 KRT16P2-201ENST00000414673 1423 ntBASIC14.09□□□□□ -0.15
RAB5BP61020 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB5BP61020 MIR4787-201ENST00000607364 84 ntBASIC14.09□□□□□ -0.15
RAB5BP61020 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB5BP61020 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB5BP61020 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5BP61020 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5BP61020 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RAB5BP61020 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.08□□□□□ -0.15
RAB5BP61020 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5BP61020 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5BP61020 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB5BP61020 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5BP61020 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5BP61020 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5BP61020 OR2I1P-209ENST00000641730 5365 ntBASIC14.08□□□□□ -0.15
RAB5BP61020 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB5BP61020 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB5BP61020 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 AL096828.2-201ENST00000567259 1965 ntBASIC14.08□□□□□ -0.16
RAB5BP61020 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5BP61020 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5BP61020 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5BP61020 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5BP61020 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB5BP61020 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB5BP61020 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5BP61020 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB5BP61020 PGM5P4-201ENST00000421970 445 ntBASIC14.07□□□□□ -0.16
RAB5BP61020 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5BP61020 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5BP61020 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms