Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP54P61011 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP54P61011 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP54P61011 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP54P61011 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP54P61011 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.7■□□□□ 0.42
SRP54P61011 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
SRP54P61011 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.7■□□□□ 0.42
SRP54P61011 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SRP54P61011 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.7■□□□□ 0.42
SRP54P61011 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SRP54P61011 RCN1P2-201ENST00000398357 915 ntBASIC17.7■□□□□ 0.42
SRP54P61011 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
SRP54P61011 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.7■□□□□ 0.42
SRP54P61011 AC112698.1-201ENST00000510299 916 ntBASIC17.7■□□□□ 0.42
SRP54P61011 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.7■□□□□ 0.42
SRP54P61011 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.7■□□□□ 0.42
SRP54P61011 AL138831.2-201ENST00000606564 490 ntBASIC17.7■□□□□ 0.42
SRP54P61011 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.7■□□□□ 0.42
SRP54P61011 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
SRP54P61011 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP54P61011 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.69■□□□□ 0.42
SRP54P61011 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.69■□□□□ 0.42
SRP54P61011 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.69■□□□□ 0.42
SRP54P61011 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.69■□□□□ 0.42
SRP54P61011 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.69■□□□□ 0.42
SRP54P61011 AP002469.2-201ENST00000531724 424 ntBASIC17.69■□□□□ 0.42
SRP54P61011 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.69■□□□□ 0.42
SRP54P61011 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.69■□□□□ 0.42
SRP54P61011 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.69■□□□□ 0.42
SRP54P61011 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SRP54P61011 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP54P61011 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.69■□□□□ 0.42
SRP54P61011 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP54P61011 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP54P61011 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 AC125634.1-201ENST00000438758 1403 ntBASIC17.68■□□□□ 0.42
SRP54P61011 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.68■□□□□ 0.42
SRP54P61011 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRP54P61011 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.68■□□□□ 0.42
SRP54P61011 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 AF238378.1-201ENST00000526806 358 ntBASIC17.68■□□□□ 0.42
SRP54P61011 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP54P61011 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP54P61011 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP54P61011 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP54P61011 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SRP54P61011 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms