Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.13■□□□□ 0.33
GFERP55789 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 FAM220CP-201ENST00000395253 831 ntBASIC17.13■□□□□ 0.33
GFERP55789 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.13■□□□□ 0.33
GFERP55789 AC018712.1-201ENST00000455767 687 ntBASIC17.13■□□□□ 0.33
GFERP55789 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.13■□□□□ 0.33
GFERP55789 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.13■□□□□ 0.33
GFERP55789 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.13■□□□□ 0.33
GFERP55789 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.13■□□□□ 0.33
GFERP55789 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
GFERP55789 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GFERP55789 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GFERP55789 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GFERP55789 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
GFERP55789 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.12■□□□□ 0.33
GFERP55789 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 AL590627.1-203ENST00000421194 1026 ntBASIC17.12■□□□□ 0.33
GFERP55789 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.12■□□□□ 0.33
GFERP55789 RNPS1P1-201ENST00000507437 918 ntBASIC17.12■□□□□ 0.33
GFERP55789 AC073648.2-201ENST00000510116 352 ntBASIC17.12■□□□□ 0.33
GFERP55789 DUTP2-201ENST00000519164 463 ntBASIC17.12■□□□□ 0.33
GFERP55789 SART3-203ENST00000546611 1184 ntBASIC17.12■□□□□ 0.33
GFERP55789 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.12■□□□□ 0.33
GFERP55789 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 AL049840.3-201ENST00000602669 611 ntBASIC17.12■□□□□ 0.33
GFERP55789 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.12■□□□□ 0.33
GFERP55789 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GFERP55789 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
GFERP55789 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GFERP55789 AL138781.2-201ENST00000617896 1843 ntBASIC17.12■□□□□ 0.33
GFERP55789 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GFERP55789 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
GFERP55789 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GFERP55789 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.11■□□□□ 0.33
GFERP55789 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.11■□□□□ 0.33
GFERP55789 AC096633.1-201ENST00000422446 749 ntBASIC17.11■□□□□ 0.33
GFERP55789 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 SCARNA2-201ENST00000458748 420 ntBASIC17.11■□□□□ 0.33
GFERP55789 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.11■□□□□ 0.33
GFERP55789 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.11■□□□□ 0.33
GFERP55789 MIR7706-201ENST00000613747 67 ntBASIC17.11■□□□□ 0.33
GFERP55789 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 AC022898.2-201ENST00000616822 1312 ntBASIC17.11■□□□□ 0.33
GFERP55789 AC097374.2-201ENST00000618617 1306 ntBASIC17.11■□□□□ 0.33
GFERP55789 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
GFERP55789 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GFERP55789 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GFERP55789 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GFERP55789 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms