Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LIMK2P53671 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LIMK2P53671 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 SPDYE15P-201ENST00000424157 909 ntBASIC18.13■□□□□ 0.49
LIMK2P53671 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.13■□□□□ 0.49
LIMK2P53671 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.13■□□□□ 0.49
LIMK2P53671 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.13■□□□□ 0.49
LIMK2P53671 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.13■□□□□ 0.49
LIMK2P53671 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 AC093458.2-201ENST00000623150 629 ntBASIC18.13■□□□□ 0.49
LIMK2P53671 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK2P53671 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK2P53671 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LIMK2P53671 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LIMK2P53671 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.12■□□□□ 0.49
LIMK2P53671 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
LIMK2P53671 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.12■□□□□ 0.49
LIMK2P53671 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.12■□□□□ 0.49
LIMK2P53671 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK2P53671 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
LIMK2P53671 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.11■□□□□ 0.49
LIMK2P53671 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 AC034232.1-201ENST00000506026 1064 ntBASIC18.11■□□□□ 0.49
LIMK2P53671 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.11■□□□□ 0.49
LIMK2P53671 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
LIMK2P53671 AC010240.3-201ENST00000607688 395 ntBASIC18.11■□□□□ 0.49
LIMK2P53671 AC069148.1-201ENST00000608741 768 ntBASIC18.11■□□□□ 0.49
LIMK2P53671 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK2P53671 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK2P53671 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.11■□□□□ 0.49
LIMK2P53671 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms