Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HMGA2P52926 BCL2-203ENST00000589955 5011 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.4■□□□□ 0.22
HMGA2P52926 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HMGA2P52926 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMGA2P52926 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 AC113404.2-201ENST00000507884 177 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.4■□□□□ 0.22
HMGA2P52926 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HMGA2P52926 FITM1-202ENST00000559294 800 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 AC142381.4-202ENST00000563973 229 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.4■□□□□ 0.22
HMGA2P52926 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.4■□□□□ 0.22
HMGA2P52926 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGA2P52926 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGA2P52926 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGA2P52926 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 AC106820.2-201ENST00000563775 3264 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 AC009949.1-201ENST00000623048 1830 ntBASIC16.4■□□□□ 0.22
HMGA2P52926 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGA2P52926 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGA2P52926 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGA2P52926 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HMGA2P52926 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 RBM17P1-201ENST00000453646 1190 ntBASIC16.39■□□□□ 0.21
HMGA2P52926 FAM201B-201ENST00000458407 597 ntBASIC16.39■□□□□ 0.21
HMGA2P52926 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGA2P52926 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGA2P52926 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HMGA2P52926 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGA2P52926 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGA2P52926 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGA2P52926 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGA2P52926 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HMGA2P52926 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HMGA2P52926 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGA2P52926 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGA2P52926 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGA2P52926 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGA2P52926 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
HMGA2P52926 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGA2P52926 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.38■□□□□ 0.21
HMGA2P52926 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGA2P52926 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HMGA2P52926 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HMGA2P52926 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGA2P52926 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 AC016396.2-201ENST00000562575 1417 ntBASIC16.37■□□□□ 0.21
HMGA2P52926 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGA2P52926 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGA2P52926 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGA2P52926 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGA2P52926 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms