Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.48□□□□□ -1.058e-20■□□□□ 11.1
NCBP2P52298 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.42□□□□□ -1.068e-20■□□□□ 11.1
NCBP2P52298 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.35□□□□□ -1.078e-20■□□□□ 11.1
NCBP2P52298 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.35□□□□□ -1.078e-20■□□□□ 11.1
NCBP2P52298 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.35□□□□□ -1.078e-20■□□□□ 11.1
NCBP2P52298 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.28□□□□□ -1.088e-20■□□□□ 11.1
NCBP2P52298 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.28□□□□□ -1.088e-20■□□□□ 11.1
NCBP2P52298 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.23□□□□□ -1.098e-20■□□□□ 11.1
NCBP2P52298 MFSD8-214ENST00000641140 886 nt8.22□□□□□ -1.096e-10■□□□□ 11.1
NCBP2P52298 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.14□□□□□ -1.118e-20■□□□□ 11.1
NCBP2P52298 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.126e-10■□□□□ 11.1
NCBP2P52298 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.126e-10■□□□□ 11.1
NCBP2P52298 EIF3L-211ENST00000476955 583 ntTSL 58□□□□□ -1.136e-10■□□□□ 11.1
NCBP2P52298 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.99□□□□□ -1.138e-20■□□□□ 11.1
NCBP2P52298 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.93□□□□□ -1.148e-20■□□□□ 11.1
NCBP2P52298 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.93□□□□□ -1.148e-20■□□□□ 11.1
NCBP2P52298 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.9□□□□□ -1.158e-20■□□□□ 11.1
NCBP2P52298 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.87□□□□□ -1.158e-20■□□□□ 11.1
NCBP2P52298 LINC01089-212ENST00000545885 559 ntTSL 27.87□□□□□ -1.156e-10■□□□□ 11.1
NCBP2P52298 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.79□□□□□ -1.168e-20■□□□□ 11.1
NCBP2P52298 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.78□□□□□ -1.168e-20■□□□□ 11.1
NCBP2P52298 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.71□□□□□ -1.178e-20■□□□□ 11.1
NCBP2P52298 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.7□□□□□ -1.186e-10■□□□□ 11.1
NCBP2P52298 PTBP2-207ENST00000476419 1691 ntTSL 1 (best)7.57□□□□□ -1.26e-10■□□□□ 11.1
NCBP2P52298 MFSD8-224ENST00000641356 493 nt7.45□□□□□ -1.226e-10■□□□□ 11.1
NCBP2P52298 MFSD8-218ENST00000641186 4448 ntBASIC7.44□□□□□ -1.226e-10■□□□□ 11.1
NCBP2P52298 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.43□□□□□ -1.228e-20■□□□□ 11.1
NCBP2P52298 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.42□□□□□ -1.228e-20■□□□□ 11.1
NCBP2P52298 MFSD8-243ENST00000641695 1455 ntBASIC7.34□□□□□ -1.236e-10■□□□□ 11.1
NCBP2P52298 MFSD8-227ENST00000641393 4069 ntBASIC7.3□□□□□ -1.246e-10■□□□□ 11.1
NCBP2P52298 MFSD8-251ENST00000641843 1596 nt7.29□□□□□ -1.246e-10■□□□□ 11.1
NCBP2P52298 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.256e-10■□□□□ 11.1
NCBP2P52298 MFSD8-221ENST00000641264 788 nt7.21□□□□□ -1.266e-10■□□□□ 11.1
NCBP2P52298 MFSD8-234ENST00000641503 1082 ntBASIC7.21□□□□□ -1.266e-10■□□□□ 11.1
NCBP2P52298 MFSD8-249ENST00000641776 673 nt7.21□□□□□ -1.266e-10■□□□□ 11.1
NCBP2P52298 EIF3L-212ENST00000477256 1708 ntTSL 56.99□□□□□ -1.296e-10■□□□□ 11.1
NCBP2P52298 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.98□□□□□ -1.298e-20■□□□□ 11.1
NCBP2P52298 MFSD8-253ENST00000641870 2109 nt6.97□□□□□ -1.296e-10■□□□□ 11.1
NCBP2P52298 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.94□□□□□ -1.38e-20■□□□□ 11.1
NCBP2P52298 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.94□□□□□ -1.38e-20■□□□□ 11.1
NCBP2P52298 MFSD8-246ENST00000641748 3201 nt6.88□□□□□ -1.316e-10■□□□□ 11.1
NCBP2P52298 MFSD8-217ENST00000641178 4374 ntBASIC6.85□□□□□ -1.316e-10■□□□□ 11.1
NCBP2P52298 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.84□□□□□ -1.318e-20■□□□□ 11.1
NCBP2P52298 MFSD8-260ENST00000642078 1747 nt6.81□□□□□ -1.326e-10■□□□□ 11.1
NCBP2P52298 MFSD8-244ENST00000641742 1823 nt6.8□□□□□ -1.326e-10■□□□□ 11.1
NCBP2P52298 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.73□□□□□ -1.336e-10■□□□□ 11.1
NCBP2P52298 MFSD8-256ENST00000641949 1640 ntBASIC6.72□□□□□ -1.336e-10■□□□□ 11.1
NCBP2P52298 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.07□□□□□ -1.448e-20■□□□□ 11.1
NCBP2P52298 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.07□□□□□ -1.448e-20■□□□□ 11.1
NCBP2P52298 EIF3L-204ENST00000414316 581 ntTSL 55.89□□□□□ -1.476e-10■□□□□ 11.1
NCBP2P52298 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.476e-10■□□□□ 11.1
NCBP2P52298 MFSD8-223ENST00000641340 2098 nt5.73□□□□□ -1.496e-10■□□□□ 11.1
NCBP2P52298 MFSD8-222ENST00000641332 2759 nt5.72□□□□□ -1.496e-10■□□□□ 11.1
NCBP2P52298 EIF3L-206ENST00000439997 787 ntTSL 55.68□□□□□ -1.56e-10■□□□□ 11.1
NCBP2P52298 MFSD8-225ENST00000641369 641 nt5.59□□□□□ -1.516e-10■□□□□ 11.1
NCBP2P52298 MFSD8-219ENST00000641228 2559 ntBASIC5.49□□□□□ -1.536e-10■□□□□ 11.1
NCBP2P52298 MFSD8-239ENST00000641590 2479 ntBASIC5.48□□□□□ -1.536e-10■□□□□ 11.1
NCBP2P52298 MFSD8-230ENST00000641434 3209 nt5.29□□□□□ -1.566e-10■□□□□ 11.1
NCBP2P52298 MFSD8-228ENST00000641397 3925 nt5.21□□□□□ -1.586e-10■□□□□ 11.1
NCBP2P52298 MFSD8-240ENST00000641658 1731 nt4.91□□□□□ -1.626e-10■□□□□ 11.1
NCBP2P52298 MFSD8-235ENST00000641508 4321 nt4.53□□□□□ -1.686e-10■□□□□ 11.1
NCBP2P52298 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.746e-10■□□□□ 11.1
NCBP2P52298 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.766e-10■□□□□ 11.1
NCBP2P52298 MFSD8-211ENST00000641092 4054 nt3.97□□□□□ -1.776e-10■□□□□ 11.1
NCBP2P52298 MFSD8-212ENST00000641133 5109 nt3.8□□□□□ -1.86e-10■□□□□ 11.1
NCBP2P52298 MFSD8-258ENST00000642034 4132 nt3.77□□□□□ -1.816e-10■□□□□ 11.1
NCBP2P52298 MFSD8-220ENST00000641243 1422 ntBASIC3.56□□□□□ -1.846e-10■□□□□ 11.1
NCBP2P52298 EIF3L-205ENST00000436452 574 ntTSL 43.55□□□□□ -1.846e-10■□□□□ 11.1
NCBP2P52298 MFSD8-255ENST00000641928 4083 nt3.55□□□□□ -1.846e-10■□□□□ 11.1
NCBP2P52298 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.866e-10■□□□□ 11.1
NCBP2P52298 MFSD8-232ENST00000641464 4197 nt3.35□□□□□ -1.876e-10■□□□□ 11.1
NCBP2P52298 MFSD8-248ENST00000641774 4247 nt3.35□□□□□ -1.876e-10■□□□□ 11.1
NCBP2P52298 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.896e-10■□□□□ 11.1
NCBP2P52298 MFSD8-213ENST00000641134 1327 ntBASIC3.26□□□□□ -1.896e-10■□□□□ 11.1
NCBP2P52298 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.96e-10■□□□□ 11.1
NCBP2P52298 MFSD8-210ENST00000641025 4261 nt2.93□□□□□ -1.946e-10■□□□□ 11.1
NCBP2P52298 MFSD8-245ENST00000641743 948 ntBASIC2.79□□□□□ -1.966e-10■□□□□ 11.1
NCBP2P52298 MFSD8-205ENST00000508441 787 ntTSL 32.65□□□□□ -1.996e-10■□□□□ 11.1
NCBP2P52298 MFSD8-238ENST00000641558 526 nt1.68□□□□□ -2.146e-10■□□□□ 11.1
NCBP2P52298 WWTR1-202ENST00000460517 604 ntTSL 318.91■□□□□ 0.623e-6■□□□□ 11.1
NCBP2P52298 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.213e-6■□□□□ 11.1
NCBP2P52298 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.063e-6■□□□□ 11.1
NCBP2P52298 WWTR1-208ENST00000475579 578 ntTSL 414.85□□□□□ -0.033e-6■□□□□ 11.1
NCBP2P52298 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.253e-6■□□□□ 11.1
NCBP2P52298 ADD1-215ENST00000510101 704 ntTSL 323.04■■□□□ 1.281e-7■□□□□ 11.1
NCBP2P52298 ADD1-213ENST00000508684 3059 ntTSL 219.87■□□□□ 0.771e-7■□□□□ 11.1
NCBP2P52298 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.111e-7■□□□□ 11.1
NCBP2P52298 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.61■□□□□ 0.091e-7■□□□□ 11.1
NCBP2P52298 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.9□□□□□ -0.341e-7■□□□□ 11.1
NCBP2P52298 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC10.64□□□□□ -0.711e-7■□□□□ 11.1
NCBP2P52298 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC9.81□□□□□ -0.841e-7■□□□□ 11.1
NCBP2P52298 ADD1-216ENST00000511797 671 ntTSL 59.42□□□□□ -0.91e-7■□□□□ 11.1
NCBP2P52298 ADD1-214ENST00000509039 1569 ntTSL 28.97□□□□□ -0.971e-7■□□□□ 11.1
NCBP2P52298 ADD1-212ENST00000508277 491 ntTSL 58.63□□□□□ -1.031e-7■□□□□ 11.1
NCBP2P52298 ADD1-224ENST00000539108 244 ntTSL 36.56□□□□□ -1.361e-7■□□□□ 11.1
NCBP2P52298 ADD1-226ENST00000540541 546 ntTSL 25.56□□□□□ -1.521e-7■□□□□ 11.1
NCBP2P52298 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.19□□□□□ -0.32e-8■□□□□ 11.1
NCBP2P52298 BFAR-210ENST00000566520 1177 ntTSL 212.57□□□□□ -0.42e-8■□□□□ 11.1
NCBP2P52298 BFAR-202ENST00000562121 723 ntTSL 511.32□□□□□ -0.62e-8■□□□□ 11.1
NCBP2P52298 BFAR-207ENST00000563971 1662 ntTSL 5 BASIC9.96□□□□□ -0.812e-8■□□□□ 11.1
Retrieved 100 of 18,329 protein–RNA pairs in 111.8 ms