Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
MRE11P49959 AC113347.1-201ENST00000413321 391 ntBASIC20.95■□□□□ 0.94
MRE11P49959 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.95■□□□□ 0.94
MRE11P49959 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.95■□□□□ 0.94
MRE11P49959 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRE11P49959 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.95■□□□□ 0.94
MRE11P49959 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
MRE11P49959 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
MRE11P49959 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
MRE11P49959 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 YBX1P10-201ENST00000444752 975 ntBASIC20.94■□□□□ 0.94
MRE11P49959 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.94■□□□□ 0.94
MRE11P49959 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
MRE11P49959 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.94■□□□□ 0.94
MRE11P49959 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
MRE11P49959 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
MRE11P49959 AC124016.1-201ENST00000609552 612 ntBASIC20.94■□□□□ 0.94
MRE11P49959 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
MRE11P49959 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.94■□□□□ 0.94
MRE11P49959 AL513477.1-201ENST00000602865 2407 ntBASIC20.94■□□□□ 0.94
MRE11P49959 PKD1P1-201ENST00000458669 6805 ntBASIC20.94■□□□□ 0.94
MRE11P49959 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRE11P49959 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MRE11P49959 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MRE11P49959 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.93■□□□□ 0.94
MRE11P49959 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KRT18P48-201ENST00000434763 852 ntBASIC20.93■□□□□ 0.94
MRE11P49959 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.93■□□□□ 0.94
MRE11P49959 TSPY23P-201ENST00000440136 739 ntBASIC20.93■□□□□ 0.94
MRE11P49959 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.93■□□□□ 0.94
MRE11P49959 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 GPALPP1-207ENST00000611650 899 ntBASIC20.93■□□□□ 0.94
MRE11P49959 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MRE11P49959 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.93■□□□□ 0.94
MRE11P49959 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.93■□□□□ 0.94
MRE11P49959 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRE11P49959 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRE11P49959 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.92■□□□□ 0.94
MRE11P49959 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MRE11P49959 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MRE11P49959 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRE11P49959 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRE11P49959 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRE11P49959 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRE11P49959 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms