Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC116407.2-201ENST00000613639 860 ntBASIC19■□□□□ 0.63
LHX1P48742 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19■□□□□ 0.63
LHX1P48742 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 BICD1-207ENST00000551848 1962 ntBASIC19■□□□□ 0.63
LHX1P48742 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LHX1P48742 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19■□□□□ 0.63
LHX1P48742 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19■□□□□ 0.63
LHX1P48742 FLJ13224-201ENST00000313737 1514 ntBASIC19■□□□□ 0.63
LHX1P48742 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LHX1P48742 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX1P48742 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
LHX1P48742 EMBP1-201ENST00000458200 901 ntBASIC18.99■□□□□ 0.63
LHX1P48742 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX1P48742 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX1P48742 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX1P48742 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX1P48742 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX1P48742 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 ABALON-201ENST00000629058 1903 ntBASIC18.98■□□□□ 0.63
LHX1P48742 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX1P48742 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LHX1P48742 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX1P48742 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LHX1P48742 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX1P48742 FAM220CP-201ENST00000395253 831 ntBASIC18.98■□□□□ 0.63
LHX1P48742 AC007967.3-201ENST00000434308 558 ntBASIC18.98■□□□□ 0.63
LHX1P48742 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LHX1P48742 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.98■□□□□ 0.63
LHX1P48742 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX1P48742 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.98■□□□□ 0.63
LHX1P48742 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.98■□□□□ 0.63
LHX1P48742 REXO1L6P-202ENST00000619970 1078 ntBASIC18.98■□□□□ 0.63
LHX1P48742 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX1P48742 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LHX1P48742 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LHX1P48742 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LHX1P48742 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX1P48742 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX1P48742 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LHX1P48742 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.97■□□□□ 0.63
LHX1P48742 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.97■□□□□ 0.63
LHX1P48742 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 SAPCD2P3-201ENST00000455031 850 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms