Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A4P31645 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A4P31645 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC6A4P31645 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC6A4P31645 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC6A4P31645 AC011467.2-201ENST00000598425 242 ntBASIC18.41■□□□□ 0.54
SLC6A4P31645 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A4P31645 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 INTS4P1-201ENST00000438455 1935 ntBASIC18.41■□□□□ 0.54
SLC6A4P31645 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC6A4P31645 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A4P31645 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A4P31645 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A4P31645 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A4P31645 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A4P31645 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 AC010460.3-201ENST00000511359 1579 ntBASIC18.4■□□□□ 0.54
SLC6A4P31645 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC6A4P31645 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SLC6A4P31645 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
SLC6A4P31645 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 AC007967.3-201ENST00000434308 558 ntBASIC18.4■□□□□ 0.54
SLC6A4P31645 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC6A4P31645 AL591684.3-201ENST00000605187 298 ntBASIC18.4■□□□□ 0.54
SLC6A4P31645 ABALON-201ENST00000629058 1903 ntBASIC18.4■□□□□ 0.54
SLC6A4P31645 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC6A4P31645 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A4P31645 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A4P31645 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A4P31645 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
SLC6A4P31645 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A4P31645 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A4P31645 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SLC6A4P31645 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 AC004870.1-201ENST00000315132 882 ntBASIC18.39■□□□□ 0.53
SLC6A4P31645 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A4P31645 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC6A4P31645 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 AC079781.3-201ENST00000449110 356 ntBASIC18.39■□□□□ 0.53
SLC6A4P31645 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A4P31645 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC6A4P31645 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A4P31645 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A4P31645 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms