Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT4P19013 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT4P19013 KRT18P6-201ENST00000555540 1265 ntBASIC18.06■□□□□ 0.48
KRT4P19013 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 DGCR10-201ENST00000609839 495 ntBASIC18.06■□□□□ 0.48
KRT4P19013 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT4P19013 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT4P19013 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
KRT4P19013 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT4P19013 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 KRT8P7-201ENST00000533003 1432 ntBASIC18.06■□□□□ 0.48
KRT4P19013 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT4P19013 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KRT4P19013 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT4P19013 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT4P19013 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT4P19013 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT4P19013 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT4P19013 FAM197Y1-201ENST00000421178 764 ntBASIC18.05■□□□□ 0.48
KRT4P19013 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT4P19013 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT4P19013 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT4P19013 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KRT4P19013 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT4P19013 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
KRT4P19013 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT4P19013 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT4P19013 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT4P19013 AL121761.2-201ENST00000598007 1648 ntBASIC18.05■□□□□ 0.48
KRT4P19013 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.04■□□□□ 0.48
KRT4P19013 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 AC128676.1-201ENST00000454392 318 ntBASIC18.04■□□□□ 0.48
KRT4P19013 DUTP2-201ENST00000519164 463 ntBASIC18.04■□□□□ 0.48
KRT4P19013 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT4P19013 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT4P19013 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KRT4P19013 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KRT4P19013 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
KRT4P19013 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT4P19013 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT4P19013 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT4P19013 RPPH1-201ENST00000516869 333 ntBASIC18.03■□□□□ 0.48
KRT4P19013 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.03■□□□□ 0.48
KRT4P19013 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.03■□□□□ 0.48
KRT4P19013 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT4P19013 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KRT4P19013 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT4P19013 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT4P19013 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms