Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC2P18074 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ERCC2P18074 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC2P18074 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC2P18074 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ERCC2P18074 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 AC068472.1-201ENST00000474589 881 ntBASIC18.5■□□□□ 0.55
ERCC2P18074 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ERCC2P18074 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC2P18074 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC2P18074 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ERCC2P18074 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 BCL2-203ENST00000589955 5011 ntBASIC18.49■□□□□ 0.55
ERCC2P18074 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.49■□□□□ 0.55
ERCC2P18074 PCED1CP-201ENST00000419887 785 ntBASIC18.49■□□□□ 0.55
ERCC2P18074 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.49■□□□□ 0.55
ERCC2P18074 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 AC116407.4-201ENST00000623319 1061 ntBASIC18.49■□□□□ 0.55
ERCC2P18074 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.49■□□□□ 0.55
ERCC2P18074 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.49■□□□□ 0.55
ERCC2P18074 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.49■□□□□ 0.55
ERCC2P18074 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 AC134043.2-201ENST00000624206 2238 ntBASIC18.49■□□□□ 0.55
ERCC2P18074 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC2P18074 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC2P18074 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC2P18074 AC012317.2-201ENST00000623305 2251 ntBASIC18.48■□□□□ 0.55
ERCC2P18074 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ERCC2P18074 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ERCC2P18074 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.48■□□□□ 0.55
ERCC2P18074 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC2P18074 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC2P18074 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC2P18074 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC2P18074 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC2P18074 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 KRT8P47-201ENST00000604727 1398 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms