Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SMPD1P17405 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMPD1P17405 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.9■□□□□ 0.78
SMPD1P17405 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMPD1P17405 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.9■□□□□ 0.78
SMPD1P17405 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.9■□□□□ 0.78
SMPD1P17405 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMPD1P17405 AC023274.1-201ENST00000418278 595 ntBASIC19.9■□□□□ 0.78
SMPD1P17405 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SMPD1P17405 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.9■□□□□ 0.78
SMPD1P17405 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
SMPD1P17405 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.9■□□□□ 0.78
SMPD1P17405 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.9■□□□□ 0.78
SMPD1P17405 AC005593.1-201ENST00000624894 515 ntBASIC19.9■□□□□ 0.78
SMPD1P17405 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 AC022898.2-201ENST00000616822 1312 ntBASIC19.9■□□□□ 0.78
SMPD1P17405 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.9■□□□□ 0.78
SMPD1P17405 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMPD1P17405 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMPD1P17405 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SMPD1P17405 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMPD1P17405 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMPD1P17405 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMPD1P17405 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMPD1P17405 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.89■□□□□ 0.77
SMPD1P17405 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 AC136632.2-201ENST00000512891 861 ntBASIC19.89■□□□□ 0.77
SMPD1P17405 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.89■□□□□ 0.77
SMPD1P17405 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SMPD1P17405 SLC25A24-204ENST00000569674 2357 ntBASIC19.89■□□□□ 0.77
SMPD1P17405 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMPD1P17405 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMPD1P17405 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
SMPD1P17405 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.89■□□□□ 0.77
SMPD1P17405 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.89■□□□□ 0.77
SMPD1P17405 PGM5P2-202ENST00000637225 1043 ntBASIC19.89■□□□□ 0.77
SMPD1P17405 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 AL049757.1-201ENST00000616842 1596 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 AL353593.2-201ENST00000602529 1483 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 AC004832.2-201ENST00000426397 482 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 AC108751.1-201ENST00000490852 363 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.88■□□□□ 0.77
SMPD1P17405 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.88■□□□□ 0.77
SMPD1P17405 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 AC064836.3-201ENST00000607928 673 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SMPD1P17405 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 AC132938.5-201ENST00000624980 1813 ntBASIC19.88■□□□□ 0.77
SMPD1P17405 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMPD1P17405 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMPD1P17405 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms