Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 KRT8P47-201ENST00000604727 1398 ntBASIC18.6■□□□□ 0.57
GJA1P17302 PMS2P7-201ENST00000506558 1336 ntBASIC18.6■□□□□ 0.57
GJA1P17302 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.6■□□□□ 0.57
GJA1P17302 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.6■□□□□ 0.57
GJA1P17302 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.6■□□□□ 0.57
GJA1P17302 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.6■□□□□ 0.57
GJA1P17302 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.6■□□□□ 0.57
GJA1P17302 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.6■□□□□ 0.57
GJA1P17302 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.6■□□□□ 0.57
GJA1P17302 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 AP000867.4-201ENST00000641616 219 ntBASIC18.6■□□□□ 0.57
GJA1P17302 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.6■□□□□ 0.57
GJA1P17302 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.6■□□□□ 0.57
GJA1P17302 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.6■□□□□ 0.57
GJA1P17302 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.6■□□□□ 0.57
GJA1P17302 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.6■□□□□ 0.57
GJA1P17302 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJA1P17302 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.59■□□□□ 0.57
GJA1P17302 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.59■□□□□ 0.57
GJA1P17302 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 AP000974.1-201ENST00000623909 2387 ntBASIC18.59■□□□□ 0.57
GJA1P17302 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.59■□□□□ 0.57
GJA1P17302 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.59■□□□□ 0.57
GJA1P17302 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.59■□□□□ 0.57
GJA1P17302 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.59■□□□□ 0.57
GJA1P17302 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.59■□□□□ 0.57
GJA1P17302 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GJA1P17302 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.59■□□□□ 0.57
GJA1P17302 AL139288.1-201ENST00000623748 933 ntBASIC18.59■□□□□ 0.57
GJA1P17302 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.59■□□□□ 0.57
GJA1P17302 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
GJA1P17302 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJA1P17302 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
GJA1P17302 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.59■□□□□ 0.57
GJA1P17302 AP002414.3-201ENST00000589352 1468 ntBASIC18.58■□□□□ 0.57
GJA1P17302 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.58■□□□□ 0.57
GJA1P17302 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.58■□□□□ 0.57
GJA1P17302 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
GJA1P17302 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GJA1P17302 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
GJA1P17302 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GJA1P17302 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.58■□□□□ 0.56
GJA1P17302 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.58■□□□□ 0.56
GJA1P17302 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.58■□□□□ 0.56
GJA1P17302 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GJA1P17302 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.58■□□□□ 0.56
GJA1P17302 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.58■□□□□ 0.56
GJA1P17302 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.58■□□□□ 0.56
GJA1P17302 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GJA1P17302 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GJA1P17302 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GJA1P17302 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GJA1P17302 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 AC093010.1-201ENST00000473625 1624 ntBASIC18.57■□□□□ 0.56
GJA1P17302 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GJA1P17302 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.57■□□□□ 0.56
GJA1P17302 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 RNA5SP415-201ENST00000517246 115 ntBASIC18.57■□□□□ 0.56
GJA1P17302 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.57■□□□□ 0.56
GJA1P17302 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.57■□□□□ 0.56
GJA1P17302 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
GJA1P17302 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GJA1P17302 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms