Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL2P13500 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL2P13500 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCL2P13500 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL2P13500 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL2P13500 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL2P13500 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL2P13500 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL2P13500 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCL2P13500 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL2P13500 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL2P13500 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL2P13500 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.67■□□□□ 0.1
CCL2P13500 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL2P13500 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCL2P13500 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCL2P13500 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL2P13500 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL2P13500 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL2P13500 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 NOC2LP1-202ENST00000452600 2235 ntBASIC15.66■□□□□ 0.1
CCL2P13500 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 TSPY12P-201ENST00000421279 868 ntBASIC15.66■□□□□ 0.1
CCL2P13500 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCL2P13500 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL2P13500 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL2P13500 AP000550.4-202ENST00000639755 178 ntBASIC15.66■□□□□ 0.1
CCL2P13500 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL2P13500 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCL2P13500 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL2P13500 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL2P13500 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL2P13500 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL2P13500 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL2P13500 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL2P13500 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL2P13500 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL2P13500 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCL2P13500 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL2P13500 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL2P13500 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms