Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
PCNAP12004 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCNAP12004 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCNAP12004 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.53■□□□□ 0.4
PCNAP12004 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.53■□□□□ 0.4
PCNAP12004 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.53■□□□□ 0.4
PCNAP12004 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.53■□□□□ 0.4
PCNAP12004 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 COX11P1-201ENST00000489116 835 ntBASIC17.53■□□□□ 0.4
PCNAP12004 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.53■□□□□ 0.4
PCNAP12004 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.53■□□□□ 0.4
PCNAP12004 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCNAP12004 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCNAP12004 AC097493.4-201ENST00000641197 219 ntBASIC17.53■□□□□ 0.4
PCNAP12004 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCNAP12004 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.53■□□□□ 0.4
PCNAP12004 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
PCNAP12004 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCNAP12004 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.53■□□□□ 0.4
PCNAP12004 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCNAP12004 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PCNAP12004 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
PCNAP12004 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 TERF1P1-201ENST00000311003 1181 ntBASIC17.52■□□□□ 0.4
PCNAP12004 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.52■□□□□ 0.4
PCNAP12004 AC034232.1-201ENST00000506026 1064 ntBASIC17.52■□□□□ 0.4
PCNAP12004 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.52■□□□□ 0.4
PCNAP12004 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.52■□□□□ 0.4
PCNAP12004 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNAP12004 AC012306.2-201ENST00000609350 630 ntBASIC17.52■□□□□ 0.4
PCNAP12004 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCNAP12004 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCNAP12004 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNAP12004 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCNAP12004 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNAP12004 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNAP12004 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNAP12004 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNAP12004 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCNAP12004 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCNAP12004 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.51■□□□□ 0.39
PCNAP12004 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNAP12004 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNAP12004 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
PCNAP12004 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
PCNAP12004 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNAP12004 AC005521.1-201ENST00000393351 872 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms