Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.25□□□□□ -0.13
PF4V1P10720 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.25□□□□□ -0.13
PF4V1P10720 AC090616.6-201ENST00000582640 721 ntBASIC14.25□□□□□ -0.13
PF4V1P10720 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.25□□□□□ -0.13
PF4V1P10720 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.25□□□□□ -0.13
PF4V1P10720 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.25□□□□□ -0.13
PF4V1P10720 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PF4V1P10720 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PF4V1P10720 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 AP002383.4-201ENST00000442518 975 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.24□□□□□ -0.13
PF4V1P10720 TOB2P1-201ENST00000469761 992 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 VENTXP7-201ENST00000475503 772 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.24□□□□□ -0.13
PF4V1P10720 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 MIR3180-1-201ENST00000580374 94 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 RN7SL510P-201ENST00000581311 263 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 MIR3180-3-201ENST00000584616 94 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 AL121772.3-201ENST00000610840 674 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 AC090164.3-201ENST00000610780 2143 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.24□□□□□ -0.13
PF4V1P10720 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.24□□□□□ -0.13
PF4V1P10720 ESPNP-201ENST00000270691 2015 ntBASIC14.24□□□□□ -0.13
PF4V1P10720 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.24□□□□□ -0.13
PF4V1P10720 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PF4V1P10720 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.23□□□□□ -0.13
PF4V1P10720 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 AL024508.2-201ENST00000607749 1894 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PF4V1P10720 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 AL845331.1-201ENST00000424978 1190 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.23□□□□□ -0.13
PF4V1P10720 NUS1P1-201ENST00000446295 882 ntBASIC14.23□□□□□ -0.13
PF4V1P10720 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.23□□□□□ -0.13
PF4V1P10720 AC104819.1-201ENST00000504587 486 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms