Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
THBS1P07996 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.55■□□□□ 0.24
THBS1P07996 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
THBS1P07996 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 HLA-F-220ENST00000434407 884 ntBASIC16.55■□□□□ 0.24
THBS1P07996 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.55■□□□□ 0.24
THBS1P07996 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.55■□□□□ 0.24
THBS1P07996 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.55■□□□□ 0.24
THBS1P07996 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.55■□□□□ 0.24
THBS1P07996 AC079602.3-201ENST00000623931 403 ntBASIC16.55■□□□□ 0.24
THBS1P07996 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.55■□□□□ 0.24
THBS1P07996 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THBS1P07996 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
THBS1P07996 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
THBS1P07996 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.54■□□□□ 0.24
THBS1P07996 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.54■□□□□ 0.24
THBS1P07996 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 AC006011.2-201ENST00000621313 1158 ntBASIC16.54■□□□□ 0.24
THBS1P07996 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.54■□□□□ 0.24
THBS1P07996 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THBS1P07996 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THBS1P07996 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
THBS1P07996 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
THBS1P07996 HTR7P1-202ENST00000624664 4411 ntBASIC16.53■□□□□ 0.24
THBS1P07996 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
THBS1P07996 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.53■□□□□ 0.24
THBS1P07996 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.53■□□□□ 0.24
THBS1P07996 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 FAM8A6P-201ENST00000407496 1135 ntBASIC16.53■□□□□ 0.24
THBS1P07996 SPDYE15P-201ENST00000424157 909 ntBASIC16.53■□□□□ 0.24
THBS1P07996 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
THBS1P07996 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.53■□□□□ 0.24
THBS1P07996 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THBS1P07996 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms