Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.94□□□□□ -0.02
CTSDP07339 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.94□□□□□ -0.02
CTSDP07339 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CTSDP07339 LINC00304-203ENST00000565008 1864 ntBASIC14.94□□□□□ -0.02
CTSDP07339 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.94□□□□□ -0.02
CTSDP07339 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.94□□□□□ -0.02
CTSDP07339 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CTSDP07339 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.93□□□□□ -0.02
CTSDP07339 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.93□□□□□ -0.02
CTSDP07339 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 HLA-J-201ENST00000462773 1622 ntBASIC14.93□□□□□ -0.02
CTSDP07339 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 ESRRAP1-201ENST00000400596 1257 ntBASIC14.93□□□□□ -0.02
CTSDP07339 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CTSDP07339 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CTSDP07339 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.93□□□□□ -0.02
CTSDP07339 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 AL024508.2-201ENST00000607749 1894 ntBASIC14.93□□□□□ -0.02
CTSDP07339 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTSDP07339 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.92□□□□□ -0.02
CTSDP07339 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.92□□□□□ -0.02
CTSDP07339 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.92□□□□□ -0.02
CTSDP07339 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 AC096733.2-201ENST00000609937 1394 ntBASIC14.92□□□□□ -0.02
CTSDP07339 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.92□□□□□ -0.02
CTSDP07339 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.92□□□□□ -0.02
CTSDP07339 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTSDP07339 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTSDP07339 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.91□□□□□ -0.02
CTSDP07339 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms