Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DRAP01903 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRAP01903 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DRAP01903 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.33■□□□□ 0.69
HLA-DRAP01903 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRAP01903 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRAP01903 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DRAP01903 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DRAP01903 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 AC091076.1-201ENST00000610741 619 ntBASIC19.33■□□□□ 0.68
HLA-DRAP01903 IGHV3-41-201ENST00000613121 348 ntBASIC19.33■□□□□ 0.68
HLA-DRAP01903 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 AC124864.1-201ENST00000623408 392 ntBASIC19.33■□□□□ 0.68
HLA-DRAP01903 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 AC068880.1-201ENST00000507289 2297 ntBASIC19.33■□□□□ 0.68
HLA-DRAP01903 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DRAP01903 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DRAP01903 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 CHCHD2P8-201ENST00000429873 447 ntBASIC19.32■□□□□ 0.68
HLA-DRAP01903 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 AC090616.6-201ENST00000582640 721 ntBASIC19.32■□□□□ 0.68
HLA-DRAP01903 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DRAP01903 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DRAP01903 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 TSSC2-201ENST00000450217 709 ntBASIC19.31■□□□□ 0.68
HLA-DRAP01903 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DRAP01903 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DRAP01903 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRAP01903 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRAP01903 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRAP01903 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DRAP01903 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DRAP01903 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DRAP01903 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DRAP01903 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRAP01903 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DRAP01903 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DRAP01903 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms