Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
TRUB2O95900 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 AC069148.1-201ENST00000608741 768 ntBASIC18.84■□□□□ 0.61
TRUB2O95900 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.84■□□□□ 0.61
TRUB2O95900 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.84■□□□□ 0.61
TRUB2O95900 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRUB2O95900 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB2O95900 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TRUB2O95900 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB2O95900 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
TRUB2O95900 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB2O95900 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB2O95900 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
TRUB2O95900 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.83■□□□□ 0.61
TRUB2O95900 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
TRUB2O95900 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRUB2O95900 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB2O95900 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRUB2O95900 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.83■□□□□ 0.6
TRUB2O95900 CHCHD2P8-201ENST00000429873 447 ntBASIC18.83■□□□□ 0.6
TRUB2O95900 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.83■□□□□ 0.6
TRUB2O95900 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 TSSC2-201ENST00000450217 709 ntBASIC18.83■□□□□ 0.6
TRUB2O95900 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.83■□□□□ 0.6
TRUB2O95900 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.83■□□□□ 0.6
TRUB2O95900 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.83■□□□□ 0.6
TRUB2O95900 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.83■□□□□ 0.6
TRUB2O95900 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.83■□□□□ 0.6
TRUB2O95900 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.83■□□□□ 0.6
TRUB2O95900 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRUB2O95900 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.83■□□□□ 0.6
TRUB2O95900 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB2O95900 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.83■□□□□ 0.6
TRUB2O95900 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB2O95900 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.82■□□□□ 0.6
TRUB2O95900 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRUB2O95900 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 GNAS-203ENST00000306120 1878 ntBASIC18.82■□□□□ 0.6
TRUB2O95900 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRUB2O95900 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.82■□□□□ 0.6
TRUB2O95900 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB2O95900 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 AC026471.1-201ENST00000564629 3026 ntBASIC18.82■□□□□ 0.6
TRUB2O95900 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.82■□□□□ 0.6
TRUB2O95900 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB2O95900 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.81■□□□□ 0.6
TRUB2O95900 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.81■□□□□ 0.6
TRUB2O95900 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB2O95900 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.81■□□□□ 0.6
TRUB2O95900 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
TRUB2O95900 KRT18P65-201ENST00000439811 1286 ntBASIC18.81■□□□□ 0.6
TRUB2O95900 GUSBP12-201ENST00000513727 720 ntBASIC18.81■□□□□ 0.6
TRUB2O95900 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.81■□□□□ 0.6
TRUB2O95900 AC090616.6-201ENST00000582640 721 ntBASIC18.81■□□□□ 0.6
TRUB2O95900 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms