Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CNOT4O95628 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 KRT18P65-201ENST00000439811 1286 ntBASIC15.97■□□□□ 0.15
CNOT4O95628 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT4O95628 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT4O95628 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT4O95628 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CNOT4O95628 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT4O95628 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 AC004870.1-201ENST00000315132 882 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 TSPY12P-201ENST00000421279 868 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT4O95628 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 AC111152.3-201ENST00000569699 673 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 MIR3180-1-201ENST00000580374 94 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 MIR3180-3-201ENST00000584616 94 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 AP002414.4-201ENST00000589764 1148 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 AL353801.3-201ENST00000609898 542 ntBASIC15.96■□□□□ 0.15
CNOT4O95628 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT4O95628 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT4O95628 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT4O95628 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CNOT4O95628 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT4O95628 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CNOT4O95628 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT4O95628 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT4O95628 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CNOT4O95628 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CNOT4O95628 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT4O95628 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT4O95628 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.95■□□□□ 0.14
CNOT4O95628 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT4O95628 TPSP2-201ENST00000561760 610 ntBASIC15.95■□□□□ 0.14
CNOT4O95628 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CNOT4O95628 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT4O95628 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms