Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR5100-201ENST00000579544 119 ntBASIC21.41■■□□□ 1.02
MBD4O95243 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD4O95243 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD4O95243 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MBD4O95243 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD4O95243 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.41■■□□□ 1.02
MBD4O95243 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MBD4O95243 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD4O95243 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD4O95243 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MBD4O95243 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MBD4O95243 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.4■■□□□ 1.02
MBD4O95243 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 AKR1C7P-201ENST00000305623 895 ntBASIC21.4■■□□□ 1.02
MBD4O95243 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.4■■□□□ 1.02
MBD4O95243 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 AC011467.2-201ENST00000598425 242 ntBASIC21.4■■□□□ 1.02
MBD4O95243 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.4■■□□□ 1.02
MBD4O95243 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 AC135050.7-201ENST00000624508 2218 ntBASIC21.4■■□□□ 1.02
MBD4O95243 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.4■■□□□ 1.02
MBD4O95243 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MBD4O95243 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD4O95243 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD4O95243 AL354751.1-201ENST00000412768 1863 ntBASIC21.39■■□□□ 1.02
MBD4O95243 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD4O95243 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD4O95243 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.39■■□□□ 1.01
MBD4O95243 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.39■■□□□ 1.01
MBD4O95243 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.39■■□□□ 1.01
MBD4O95243 AL591684.3-201ENST00000605187 298 ntBASIC21.39■■□□□ 1.01
MBD4O95243 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.39■■□□□ 1.01
MBD4O95243 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.39■■□□□ 1.01
MBD4O95243 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
MBD4O95243 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
MBD4O95243 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 NEFHP1-201ENST00000412845 2629 ntBASIC21.39■■□□□ 1.01
MBD4O95243 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MBD4O95243 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
MBD4O95243 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
MBD4O95243 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 AC007967.3-201ENST00000434308 558 ntBASIC21.38■■□□□ 1.01
MBD4O95243 TPM4P1-201ENST00000436100 807 ntBASIC21.38■■□□□ 1.01
MBD4O95243 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.38■■□□□ 1.01
MBD4O95243 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 AC010460.3-201ENST00000511359 1579 ntBASIC21.38■■□□□ 1.01
MBD4O95243 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
MBD4O95243 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MBD4O95243 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.38■■□□□ 1.01
MBD4O95243 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 INTS4P1-201ENST00000438455 1935 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms