Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BCL2-203ENST00000589955 5011 ntBASIC16.59■□□□□ 0.25
NKX2-2O95096 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NKX2-2O95096 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX2-2O95096 MTCL1P1-201ENST00000446207 792 ntBASIC16.59■□□□□ 0.25
NKX2-2O95096 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.59■□□□□ 0.25
NKX2-2O95096 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX2-2O95096 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.59■□□□□ 0.25
NKX2-2O95096 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NKX2-2O95096 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.59■□□□□ 0.25
NKX2-2O95096 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX2-2O95096 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX2-2O95096 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NKX2-2O95096 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX2-2O95096 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.58■□□□□ 0.25
NKX2-2O95096 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NKX2-2O95096 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NKX2-2O95096 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.58■□□□□ 0.24
NKX2-2O95096 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX2-2O95096 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.58■□□□□ 0.24
NKX2-2O95096 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
NKX2-2O95096 AC011498.5-201ENST00000592027 486 ntBASIC16.58■□□□□ 0.24
NKX2-2O95096 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NKX2-2O95096 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NKX2-2O95096 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NKX2-2O95096 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX2-2O95096 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NKX2-2O95096 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
NKX2-2O95096 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.57■□□□□ 0.24
NKX2-2O95096 AC005332.1-201ENST00000577698 1310 ntBASIC16.57■□□□□ 0.24
NKX2-2O95096 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 TSPY22P-201ENST00000427496 604 ntBASIC16.57■□□□□ 0.24
NKX2-2O95096 DDX43P3-201ENST00000441064 443 ntBASIC16.57■□□□□ 0.24
NKX2-2O95096 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 FAM86EP-206ENST00000510506 987 ntBASIC16.57■□□□□ 0.24
NKX2-2O95096 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX2-2O95096 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX2-2O95096 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NKX2-2O95096 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX2-2O95096 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NKX2-2O95096 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX2-2O95096 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX2-2O95096 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms