Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLPXO76031 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPXO76031 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPXO76031 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLPXO76031 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPXO76031 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPXO76031 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPXO76031 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.35■□□□□ 0.21
CLPXO76031 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPXO76031 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPXO76031 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLPXO76031 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 OR6D1P-203ENST00000641209 4860 ntBASIC16.35■□□□□ 0.21
CLPXO76031 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 AC124283.5-201ENST00000624661 1809 ntBASIC16.35■□□□□ 0.21
CLPXO76031 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLPXO76031 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPXO76031 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPXO76031 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPXO76031 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLPXO76031 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPXO76031 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.34■□□□□ 0.21
CLPXO76031 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 TSPY21P-201ENST00000433481 731 ntBASIC16.34■□□□□ 0.21
CLPXO76031 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 AP003097.1-201ENST00000530657 1135 ntBASIC16.34■□□□□ 0.21
CLPXO76031 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 SOX15-203ENST00000570788 1093 ntBASIC16.34■□□□□ 0.21
CLPXO76031 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.34■□□□□ 0.21
CLPXO76031 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.34■□□□□ 0.21
CLPXO76031 AC006557.6-201ENST00000623071 864 ntBASIC16.34■□□□□ 0.21
CLPXO76031 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLPXO76031 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLPXO76031 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPXO76031 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPXO76031 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPXO76031 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLPXO76031 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLPXO76031 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLPXO76031 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLPXO76031 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.33■□□□□ 0.21
CLPXO76031 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLPXO76031 PCDHB17P-201ENST00000539533 2393 ntBASIC16.33■□□□□ 0.2
CLPXO76031 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 AL158047.1-201ENST00000445918 881 ntBASIC16.33■□□□□ 0.2
CLPXO76031 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.33■□□□□ 0.2
CLPXO76031 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.33■□□□□ 0.2
CLPXO76031 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.33■□□□□ 0.2
CLPXO76031 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.33■□□□□ 0.2
CLPXO76031 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.33■□□□□ 0.2
CLPXO76031 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 RCC2P6-201ENST00000526625 1557 ntBASIC16.33■□□□□ 0.2
CLPXO76031 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.33■□□□□ 0.2
CLPXO76031 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPXO76031 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.33■□□□□ 0.2
CLPXO76031 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLPXO76031 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms