Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AC009949.1-201ENST00000623048 1830 ntBASIC17.28■□□□□ 0.36
PRAMEF4O60810 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AC009154.2-201ENST00000621177 724 ntBASIC17.28■□□□□ 0.36
PRAMEF4O60810 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 Z83836.1-201ENST00000624605 1642 ntBASIC17.28■□□□□ 0.36
PRAMEF4O60810 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF4O60810 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF4O60810 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AC022898.2-201ENST00000616822 1312 ntBASIC17.27■□□□□ 0.36
PRAMEF4O60810 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AL031133.1-201ENST00000406807 723 ntBASIC17.27■□□□□ 0.36
PRAMEF4O60810 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 FAM210CP-201ENST00000445714 574 ntBASIC17.27■□□□□ 0.36
PRAMEF4O60810 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AC068472.1-201ENST00000474589 881 ntBASIC17.27■□□□□ 0.36
PRAMEF4O60810 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PRAMEF4O60810 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
PRAMEF4O60810 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF4O60810 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms