Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNND1O60716 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTNND1O60716 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNND1O60716 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNND1O60716 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CTNND1O60716 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNND1O60716 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 AC018445.3-201ENST00000624177 1945 ntBASIC20.92■□□□□ 0.94
CTNND1O60716 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.92■□□□□ 0.94
CTNND1O60716 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.92■□□□□ 0.94
CTNND1O60716 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CTNND1O60716 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CTNND1O60716 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNND1O60716 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNND1O60716 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNND1O60716 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNND1O60716 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNND1O60716 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNND1O60716 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.92■□□□□ 0.94
CTNND1O60716 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CTNND1O60716 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNND1O60716 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNND1O60716 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.91■□□□□ 0.94
CTNND1O60716 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CTNND1O60716 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CTNND1O60716 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CTNND1O60716 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.91■□□□□ 0.94
CTNND1O60716 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.91■□□□□ 0.94
CTNND1O60716 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.91■□□□□ 0.94
CTNND1O60716 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.91■□□□□ 0.94
CTNND1O60716 AL031598.1-201ENST00000561511 1773 ntBASIC20.91■□□□□ 0.94
CTNND1O60716 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.91■□□□□ 0.94
CTNND1O60716 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNND1O60716 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.9■□□□□ 0.94
CTNND1O60716 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 AC093010.1-201ENST00000473625 1624 ntBASIC20.9■□□□□ 0.94
CTNND1O60716 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.9■□□□□ 0.94
CTNND1O60716 SIGLEC16-201ENST00000599858 1437 ntBASIC20.9■□□□□ 0.94
CTNND1O60716 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTNND1O60716 UPF3AP3-201ENST00000420996 769 ntBASIC20.9■□□□□ 0.94
CTNND1O60716 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CTNND1O60716 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.9■□□□□ 0.94
CTNND1O60716 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.9■□□□□ 0.94
CTNND1O60716 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.9■□□□□ 0.94
CTNND1O60716 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.9■□□□□ 0.94
CTNND1O60716 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CTNND1O60716 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTNND1O60716 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTNND1O60716 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNND1O60716 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTNND1O60716 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTNND1O60716 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.89■□□□□ 0.94
CTNND1O60716 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTNND1O60716 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CTNND1O60716 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms