Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PFDN6O15212 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 STARP1-201ENST00000397973 869 ntBASIC18.02■□□□□ 0.48
PFDN6O15212 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN6O15212 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.02■□□□□ 0.48
PFDN6O15212 HOMER2P1-201ENST00000455653 964 ntBASIC18.02■□□□□ 0.48
PFDN6O15212 DUTP2-201ENST00000519164 463 ntBASIC18.02■□□□□ 0.48
PFDN6O15212 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN6O15212 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.02■□□□□ 0.48
PFDN6O15212 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN6O15212 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN6O15212 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PFDN6O15212 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.02■□□□□ 0.48
PFDN6O15212 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN6O15212 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PFDN6O15212 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN6O15212 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.02■□□□□ 0.47
PFDN6O15212 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PFDN6O15212 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN6O15212 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PFDN6O15212 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN6O15212 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PFDN6O15212 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.01■□□□□ 0.47
PFDN6O15212 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PFDN6O15212 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PFDN6O15212 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 AC211429.1-201ENST00000415277 523 ntBASIC18.01■□□□□ 0.47
PFDN6O15212 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.01■□□□□ 0.47
PFDN6O15212 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 YBX1P2-201ENST00000489612 999 ntBASIC18.01■□□□□ 0.47
PFDN6O15212 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.01■□□□□ 0.47
PFDN6O15212 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.01■□□□□ 0.47
PFDN6O15212 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.01■□□□□ 0.47
PFDN6O15212 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PFDN6O15212 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PFDN6O15212 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PFDN6O15212 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PFDN6O15212 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 AC008764.6-201ENST00000595909 2069 ntBASIC18■□□□□ 0.47
PFDN6O15212 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18■□□□□ 0.47
PFDN6O15212 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18■□□□□ 0.47
PFDN6O15212 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PFDN6O15212 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PFDN6O15212 AC005521.1-201ENST00000393351 872 ntBASIC18■□□□□ 0.47
PFDN6O15212 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
PFDN6O15212 AL441883.1-201ENST00000566170 1045 ntBASIC18■□□□□ 0.47
PFDN6O15212 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18■□□□□ 0.47
PFDN6O15212 AL136038.4-201ENST00000603606 1261 ntBASIC18■□□□□ 0.47
PFDN6O15212 AC139887.4-201ENST00000607877 719 ntBASIC18■□□□□ 0.47
PFDN6O15212 AC011558.1-201ENST00000623459 338 ntBASIC18■□□□□ 0.47
PFDN6O15212 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18■□□□□ 0.47
PFDN6O15212 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 GNAS-203ENST00000306120 1878 ntBASIC18■□□□□ 0.47
PFDN6O15212 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18■□□□□ 0.47
PFDN6O15212 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18■□□□□ 0.47
PFDN6O15212 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
PFDN6O15212 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18■□□□□ 0.47
PFDN6O15212 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.99■□□□□ 0.47
PFDN6O15212 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.99■□□□□ 0.47
PFDN6O15212 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PFDN6O15212 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PFDN6O15212 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PFDN6O15212 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms