Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TUBB3P1-201ENST00000405796 1332 ntBASIC28.84■■■□□ 2.21
CHD1O14646 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC28.84■■■□□ 2.21
CHD1O14646 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
CHD1O14646 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
CHD1O14646 MRPS18AP1-201ENST00000414458 589 ntBASIC28.83■■■□□ 2.21
CHD1O14646 FALEC-201ENST00000416894 566 ntTSL 3 BASIC28.83■■■□□ 2.21
CHD1O14646 FAM58DP-201ENST00000428076 619 ntBASIC28.83■■■□□ 2.21
CHD1O14646 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC28.83■■■□□ 2.21
CHD1O14646 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC28.83■■■□□ 2.21
CHD1O14646 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
CHD1O14646 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC28.83■■■□□ 2.21
CHD1O14646 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
CHD1O14646 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CHD1O14646 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD1O14646 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC28.83■■■□□ 2.21
CHD1O14646 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC28.83■■■□□ 2.21
CHD1O14646 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CHD1O14646 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC28.82■■■□□ 2.2
CHD1O14646 AC245100.3-201ENST00000441281 285 ntBASIC28.82■■■□□ 2.2
CHD1O14646 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC28.82■■■□□ 2.2
CHD1O14646 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC28.82■■■□□ 2.2
CHD1O14646 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC28.82■■■□□ 2.2
CHD1O14646 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CHD1O14646 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHD1O14646 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC28.81■■■□□ 2.2
CHD1O14646 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHD1O14646 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CHD1O14646 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC28.81■■■□□ 2.2
CHD1O14646 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC28.81■■■□□ 2.2
CHD1O14646 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHD1O14646 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHD1O14646 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
CHD1O14646 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHD1O14646 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHD1O14646 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CHD1O14646 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC28.81■■■□□ 2.2
CHD1O14646 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC28.81■■■□□ 2.2
CHD1O14646 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CHD1O14646 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 CR383656.12-201ENST00000549567 513 ntBASIC28.8■■■□□ 2.2
CHD1O14646 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC28.8■■■□□ 2.2
CHD1O14646 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC28.8■■■□□ 2.2
CHD1O14646 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC28.8■■■□□ 2.2
CHD1O14646 AL158211.3-201ENST00000607385 239 ntBASIC28.8■■■□□ 2.2
CHD1O14646 AC116407.2-201ENST00000613639 860 ntBASIC28.8■■■□□ 2.2
CHD1O14646 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC28.8■■■□□ 2.2
CHD1O14646 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 AL135744.1-201ENST00000565098 629 ntBASIC28.8■■■□□ 2.2
CHD1O14646 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHD1O14646 AC019129.2-201ENST00000609837 1235 ntBASIC28.8■■■□□ 2.2
CHD1O14646 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CHD1O14646 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC28.79■■■□□ 2.2
CHD1O14646 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHD1O14646 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
CHD1O14646 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHD1O14646 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHD1O14646 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC28.79■■■□□ 2.2
CHD1O14646 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC28.79■■■□□ 2.2
CHD1O14646 IGHV3-71-201ENST00000523324 359 ntBASIC28.79■■■□□ 2.2
CHD1O14646 AL596325.1-201ENST00000563991 1082 ntBASIC28.79■■■□□ 2.2
CHD1O14646 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC28.79■■■□□ 2.2
CHD1O14646 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC28.79■■■□□ 2.2
CHD1O14646 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC28.79■■■□□ 2.2
CHD1O14646 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC28.79■■■□□ 2.2
CHD1O14646 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHD1O14646 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHD1O14646 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHD1O14646 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC28.78■■■□□ 2.2
CHD1O14646 AC092580.3-201ENST00000430932 139 ntBASIC28.78■■■□□ 2.2
CHD1O14646 U91328.1-201ENST00000437528 223 ntBASIC28.78■■■□□ 2.2
CHD1O14646 DDX43P3-201ENST00000441064 443 ntBASIC28.78■■■□□ 2.2
CHD1O14646 SERBP1P5-201ENST00000510079 1181 ntBASIC28.78■■■□□ 2.2
CHD1O14646 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC28.78■■■□□ 2.2
CHD1O14646 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC28.78■■■□□ 2.2
CHD1O14646 AL512356.2-201ENST00000546955 174 ntBASIC28.78■■■□□ 2.2
CHD1O14646 AL358472.5-202ENST00000641448 1267 ntBASIC28.78■■■□□ 2.2
CHD1O14646 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms