Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
UBFD1O14562 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBFD1O14562 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBFD1O14562 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
UBFD1O14562 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.44■□□□□ 0.38
UBFD1O14562 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UBFD1O14562 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.44■□□□□ 0.38
UBFD1O14562 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.44■□□□□ 0.38
UBFD1O14562 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.44■□□□□ 0.38
UBFD1O14562 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
UBFD1O14562 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
UBFD1O14562 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 AC009949.1-201ENST00000623048 1830 ntBASIC17.44■□□□□ 0.38
UBFD1O14562 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
UBFD1O14562 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBFD1O14562 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBFD1O14562 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
UBFD1O14562 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 REXO1L11P-201ENST00000620964 1927 ntBASIC17.43■□□□□ 0.38
UBFD1O14562 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.43■□□□□ 0.38
UBFD1O14562 ECEL1P3-201ENST00000427961 737 ntBASIC17.43■□□□□ 0.38
UBFD1O14562 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.43■□□□□ 0.38
UBFD1O14562 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.43■□□□□ 0.38
UBFD1O14562 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.43■□□□□ 0.38
UBFD1O14562 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBFD1O14562 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 AC022898.2-201ENST00000616822 1312 ntBASIC17.43■□□□□ 0.38
UBFD1O14562 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBFD1O14562 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.42■□□□□ 0.38
UBFD1O14562 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
UBFD1O14562 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBFD1O14562 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.42■□□□□ 0.38
UBFD1O14562 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.42■□□□□ 0.38
UBFD1O14562 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.42■□□□□ 0.38
UBFD1O14562 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.42■□□□□ 0.38
UBFD1O14562 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
UBFD1O14562 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBFD1O14562 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBFD1O14562 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
UBFD1O14562 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBFD1O14562 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBFD1O14562 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBFD1O14562 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.41■□□□□ 0.38
UBFD1O14562 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBFD1O14562 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms