Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.17■□□□□ 0.66
O00370 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.17■□□□□ 0.66
O00370 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.17■□□□□ 0.66
O00370 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.17■□□□□ 0.66
O00370 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.17■□□□□ 0.66
O00370 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.17■□□□□ 0.66
O00370 AL358472.4-201ENST00000633140 710 ntBASIC19.17■□□□□ 0.66
O00370 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.17■□□□□ 0.66
O00370 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.17■□□□□ 0.66
O00370 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
O00370 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
O00370 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.16■□□□□ 0.66
O00370 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
O00370 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.16■□□□□ 0.66
O00370 FLJ13224-201ENST00000313737 1514 ntBASIC19.16■□□□□ 0.66
O00370 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.16■□□□□ 0.66
O00370 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.16■□□□□ 0.66
O00370 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
O00370 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.16■□□□□ 0.66
O00370 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.16■□□□□ 0.66
O00370 TSPY22P-201ENST00000427496 604 ntBASIC19.16■□□□□ 0.66
O00370 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.16■□□□□ 0.66
O00370 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
O00370 DUTP2-201ENST00000519164 463 ntBASIC19.16■□□□□ 0.66
O00370 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.16■□□□□ 0.66
O00370 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.16■□□□□ 0.66
O00370 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.16■□□□□ 0.66
O00370 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
O00370 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
O00370 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
O00370 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
O00370 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
O00370 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
O00370 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
O00370 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
O00370 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.15■□□□□ 0.66
O00370 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.15■□□□□ 0.66
O00370 KRT18P65-201ENST00000439811 1286 ntBASIC19.15■□□□□ 0.66
O00370 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.15■□□□□ 0.66
O00370 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.15■□□□□ 0.66
O00370 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
O00370 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.15■□□□□ 0.66
O00370 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.15■□□□□ 0.66
O00370 AP000550.4-202ENST00000639755 178 ntBASIC19.15■□□□□ 0.66
O00370 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.15■□□□□ 0.66
O00370 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 IER3-202ENST00000376377 1350 ntBASIC19.15■□□□□ 0.66
O00370 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
O00370 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
O00370 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
O00370 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
O00370 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
O00370 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
O00370 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
O00370 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
O00370 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
O00370 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
O00370 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
O00370 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
O00370 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
O00370 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
O00370 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.14■□□□□ 0.65
O00370 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
O00370 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.14■□□□□ 0.65
O00370 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms