Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 AC133681.1-201ENST00000465482 601 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 AC142086.2-201ENST00000569753 217 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 AC104771.1-201ENST00000603335 964 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 CR392000.1-201ENST00000624770 1228 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 AL031985.4-201ENST00000642138 673 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 LINC02199-201ENST00000506655 2702 ntBASIC15.68■□□□□ 0.1
SHISA3A0PJX4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHISA3A0PJX4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 AC110285.5-201ENST00000611501 352 ntBASIC15.67■□□□□ 0.1
SHISA3A0PJX4 MIR6786-201ENST00000616843 113 ntBASIC15.67■□□□□ 0.1
SHISA3A0PJX4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 AC008741.2-201ENST00000612792 3115 ntBASIC15.67■□□□□ 0.1
SHISA3A0PJX4 HOXB1-202ENST00000577092 1414 ntBASIC15.67■□□□□ 0.1
SHISA3A0PJX4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHISA3A0PJX4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AP000692.2-201ENST00000608391 879 ntBASIC15.66■□□□□ 0.1
SHISA3A0PJX4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AC011270.2-201ENST00000624293 2550 ntBASIC15.66■□□□□ 0.1
SHISA3A0PJX4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHISA3A0PJX4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms