Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV9S1A1TA0A576 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 AC022898.2-201ENST00000616822 1312 ntBASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 MIR718-201ENST00000390190 70 ntBASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 AC009947.2-201ENST00000444014 672 ntBASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 EGLN1P1-201ENST00000531623 762 ntBASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TCRBV9S1A1TA0A576 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 AL355075.4-201ENST00000554988 638 ntBASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV9S1A1TA0A576 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV9S1A1TA0A576 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 MIR3917-201ENST00000580971 93 ntBASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 AC008687.5-201ENST00000593746 558 ntBASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms